Curriculum vitae Dr. Johan Rollin

Github: https://github.com/johrollin

Personal Data 

Title                                    Dr.       

First name                          Johan

Name                                 Rollin

Current position                 Postdoctoral fellow

Identifiers/ORCID              0000-0002-9564-7872

Qualifications and Career   

Degree programme           2011-2014 Biology, BSc, Université de Nîmes, France 

                                           2014-2016 Bioinformatic, MSc, Université d’Aix-Marseille, France

Doctorate                           2019-2023, Doctoral studies on bioinformatic analysis for plant virus detection, DNAVision/université de Liège, Belgium

Further stages                    2016-2019 Engineer for the LABGeM team in Evry, France, to implement several tools for bacterial analysis.

Engagement in the Research System 

Mentoring of internships

Organisation of bioinformatics workshop for students and researchers (France and Belgium)

Coordination of international laboratories (bioinformatics) activities for the improvement of viral SNPs detection.

Scientific Results

Lebas B,  Adams I,  Al Rwahnih M,  Baeyen S,  Bilodeau GJ, Blouin AG,…Rollin J et al. (2022) Facilitating the adoption of high-throughput sequencing technologies as a plant pest diagnostic test in laboratories: A step-by-step description. EPPO Bulletin,  52,  394– 418. https://doi.org/10.1111/epp.12863

Kutnjak D, Tamisier L, Adams I, Boonham N, Candresse T, Chiumenti M, De Jonghe K, Kreuze JF, Lefebvre M, Silva G, Malapi-Wight M, Margaria P, Mavrič Pleško I, McGreig S, Miozzi L, Remenant B, Reynard JS, Rollin J, Rott M, Schumpp O, Massart S, Haegeman A. (2021) A Primer on the Analysis of High-Throughput Sequencing Data for Detection of Plant Viruses. Microorganisms. 14;9(4):841. doi: 10.3390/microorganisms9040841. 

Vallenet D, Calteau A, Dubois M, Amours P, Bazin A, Beuvin M, Burlot L, Bussell X, Fouteau S, Gautreau G, Lajus A, Langlois J, Planel R, Roche D, Rollin J, Rouy Z, Sabatet V, Médigue C. (2020) MicroScope: an integrated platform for the annotation and exploration of microbial gene functions through genomic, pangenomic and metabolic comparative analysis. Nucleic Acids Res. 8;48(D1):D579-D589. doi: 10.1093/nar/gkz926.